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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
21252

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PLCD1 HGNC:9060 (HGNC)
5333 (Entrez Gene)
602142 (OMIM)
Chr3 p22-p21.3 Chr3:38007496-38029663 (-)
GRCh38
Nail Disorder, Nonsyndromic Congenital, 3; NDNC3
P51178 (UniProt | EBI)
NM_006225 (RefSeq)
mouse Plcd1 MGI:97614 (MGI)
18799 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 71.32 cM Chr9:119071527-119093496 (-)
GRCm38
18799 (NCBI Gene Model)
Q8R3B1 (UniProt | EBI)
NR_121571 (RefSeq)
rat Plcd1 24655 (Entrez Gene)
Chr8 q32 P10688 (UniProt | EBI)
NM_017035 (RefSeq)
chimpanzee PLCD1 460267 (Entrez Gene)
Chr3 XP_003309769 (RefSeq)
rhesus macaque PLCD1 696860 (Entrez Gene)
Chr2 XP_001089399 (RefSeq)
cattle PLCD1 281986 (Entrez Gene)
Chr22 P10895 (UniProt | EBI)
NM_001081576 (RefSeq)
dog PLCD1 485586 (Entrez Gene)
Chr23 XP_542705 (RefSeq)
chicken PLCD1 420416 (Entrez Gene)
Chr2 XP_418522 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory