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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2122

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PTPN11 HGNC:9644 (HGNC)
5781 (Entrez Gene)
176876 (OMIM)
Chr12 q24 Chr12:112418732-112509918 (+)
GRCh38
Juvenile Myelomonocytic Leukemia; JMML
Leopard Syndrome 1
Metachondromatosis; METCDS
Noonan Syndrome 1; NS1
Q06124 (UniProt | EBI)
NM_002834 (RefSeq)
mouse Ptpn11 MGI:99511 (MGI)
19247 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 61.72 cM Chr5:121130533-121191397 (-)
GRCm38
Juvenile Myelomonocytic Leukemia; JMML
Leopard Syndrome 1
Noonan Syndrome 1; NS1
OTTMUSG00000016267 (VEGA)
OTTMUSP00000017430 (VEGA)
OTTMUST00000039010 (VEGA)
rat Ptpn11 25622 (Entrez Gene)
Chr12 q16 P41499 (UniProt | EBI)
NM_013088 (RefSeq)
chimpanzee PTPN11 467135 (Entrez Gene)
Chr12 XP_522535 (RefSeq)
rhesus macaque PTPN11 712044 (Entrez Gene)
Chr11 NP_001248038 (RefSeq)
NM_001261109 (RefSeq)
cattle PTPN11 533590 (Entrez Gene)
Chr17 XP_002694636 (RefSeq)
NM_001192779 (RefSeq)
dog PTPN11 477488 (Entrez Gene)
Chr26 XP_005636307 (RefSeq)
chicken PTPN11 395815 (Entrez Gene)
Chr15 Q90687 (UniProt | EBI)
NM_204968 (RefSeq)
zebrafish ptpn11a 333979 (Entrez Gene)
Chr10 NP_956140 (RefSeq)
NM_199846 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/23/2014
MGI 5.19
The Jackson Laboratory