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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ARID1A HGNC:11110 (HGNC)
8289 (Entrez Gene)
603024 (OMIM)
ARID1A (MyGene.info)
HGNC homology
Chr1 p36.11 Chr1:26696031-26782110 (+)
Coffin-Siris syndrome 2
O14497 (UniProt | EBI)
NM_139135 (RefSeq)
mouse Arid1a MGI:1935147 (MGI)
93760 (Entrez Gene)
Gene Tree
HGNC homology
Chr4 66.25 cM Chr4:133679008-133756769 (-)
Coffin-Siris syndrome
OTTMUSG00000011035 (VEGA)
OTTMUSP00000011856 (VEGA)
OTTMUST00000025856 (VEGA)
rat Arid1a 297867 (Entrez Gene)
Chr5 q36 NP_001100105 (RefSeq)
NM_001106635 (RefSeq)
chimpanzee ARID1A 456665 (Entrez Gene)
Chr1 XP_016812447 (RefSeq)
cattle ARID1A 540181 (Entrez Gene)
Chr2 NP_001192714 (RefSeq)
NM_001205785 (RefSeq)
dog ARID1A 487352 (Entrez Gene)
Chr2 XP_005617802 (RefSeq)
chicken ARID1A 419542 (Entrez Gene)
Chr23 XP_417693 (RefSeq)
zebrafish arid1ab 568161 (Entrez Gene)
Chr19 XP_021323975 (RefSeq)
frog, western clawed arid1a 100493385 (Entrez Gene)
Chr2 XP_002934685 (RefSeq)
macaque, rhesus ARID1A 719949 (Entrez Gene)
Chr1 XP_014987605 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory