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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
21216

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ARID1A HGNC:11110 (HGNC)
8289 (Entrez Gene)
603024 (OMIM)
Chr1 p35.3 Chr1:26696031-26782110 (+)
GRCh38
Mental Retardation, Autosomal Dominant 14; MRD14
O14497 (UniProt | EBI)
NM_006015 (RefSeq)
mouse Arid1a MGI:1935147 (MGI)
93760 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 66.25 cM Chr4:133679008-133756769 (-)
GRCm38
OTTMUSG00000011035 (VEGA)
OTTMUSP00000011856 (VEGA)
OTTMUST00000025856 (VEGA)
rat Arid1a 297867 (Entrez Gene)
Chr5 q36 NP_001100105 (RefSeq)
NM_001106635 (RefSeq)
chimpanzee ARID1A 456665 (Entrez Gene)
Chr1 XP_001144752 (RefSeq)
rhesus macaque LOC719949 719949 (Entrez Gene)
Chr1 XP_002808326 (RefSeq)
cattle ARID1A 540181 (Entrez Gene)
Chr2 NP_001192714 (RefSeq)
NM_001205785 (RefSeq)
dog ARID1A 487352 (Entrez Gene)
Chr2 XP_852546 (RefSeq)
chicken ARID1A 419542 (Entrez Gene)
Chr23 XP_417693 (RefSeq)
western clawed frog arid1a 100493385 (Entrez Gene)
ChrUN XP_002934685 (RefSeq)
zebrafish arid1ab 568161 (Entrez Gene)
Chr19 XP_696565 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory