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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
21197

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SMAD2 HGNC:6768 (HGNC)
4087 (Entrez Gene)
601366 (OMIM)
Chr18 q21.1 Chr18:47833095-47931193 (-)
GRCh38
Q15796 (UniProt | EBI)
NM_001003652 (RefSeq)
mouse Smad2 MGI:108051 (MGI)
17126 (Entrez Gene)
Gene Tree
VISTA-Point
Chr18 51.42 cM Chr18:76241580-76305731 (+)
GRCm38
OTTMUSG00000036536 (VEGA)
OTTMUSP00000052023 (VEGA)
OTTMUST00000093678 (VEGA)
rat Smad2 29357 (Entrez Gene)
Chr18 q12.3 O70436 (UniProt | EBI)
NM_019191 (RefSeq)
chimpanzee SMAD2 455407 (Entrez Gene)
Chr18 XP_001149585 (RefSeq)
rhesus macaque SMAD2 697581 (Entrez Gene)
Chr18 NP_001253732 (RefSeq)
NM_001266803 (RefSeq)
cattle SMAD2 516010 (Entrez Gene)
Chr24 Q1W668 (UniProt | EBI)
NM_001046218 (RefSeq)
dog SMAD2 480144 (Entrez Gene)
Chr7 XP_852799 (RefSeq)
chicken SMAD2 395247 (Entrez Gene)
ChrZ NP_989892 (RefSeq)
NM_204561 (RefSeq)
western clawed frog smad2 496586 (Entrez Gene)
ChrUN NP_001011168 (RefSeq)
NM_001011168 (RefSeq)
zebrafish smad2 30639 (Entrez Gene)
Chr10 Q9I9P9 (UniProt | EBI)
NM_131366 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory