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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
21196

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SMAD1 HGNC:6767 (HGNC)
4086 (Entrez Gene)
601595 (OMIM)
Chr4 q31 Chr4:145481306-145559176 (+)
GRCh38
Q15797 (UniProt | EBI)
NM_001003688 (RefSeq)
mouse Smad1 MGI:109452 (MGI)
17125 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 37.56 cM Chr8:79338395-79399518 (-)
GRCm38
Ovarian Cancer
OTTMUSG00000021109 (VEGA)
OTTMUSP00000023243 (VEGA)
OTTMUST00000049956 (VEGA)
rat Smad1 25671 (Entrez Gene)
Chr19 q11 P97588 (UniProt | EBI)
NM_013130 (RefSeq)
chimpanzee SMAD1 450142 (Entrez Gene)
Chr4 XP_001148403 (RefSeq)
rhesus macaque SMAD1 574340 (Entrez Gene)
Chr5 NP_001248296 (RefSeq)
NM_001261367 (RefSeq)
cattle SMAD1 540488 (Entrez Gene)
Chr17 Q1JQA2 (UniProt | EBI)
NM_001076223 (RefSeq)
dog SMAD1 475456 (Entrez Gene)
Chr15 XP_867318 (RefSeq)
chicken SMAD1 395680 (Entrez Gene)
Chr4 NP_001188384 (RefSeq)
NM_001201455 (RefSeq)
western clawed frog smad1 493211 (Entrez Gene)
ChrUN NP_001007481 (RefSeq)
NM_001007480 (RefSeq)
zebrafish smad1 30628 (Entrez Gene)
Chr1 Q9I8V2 (UniProt | EBI)
NM_131356 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory