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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
21175

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TRIM28 HGNC:16384 (HGNC)
10155 (Entrez Gene)
601742 (OMIM)
TRIM28 (MyGene.info)
HGNC homology
Chr19 q13.43 Chr19:58544469-58550715 (+)
GRCh38.p7
Q13263 (UniProt | EBI)
NM_005762 (RefSeq)
mouse Trim28 MGI:109274 (MGI)
21849 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr7 7.73 cM Chr7:13024152-13031032 (+)
GRCm38
21849 (NCBI Gene Model)
Q62318 (UniProt | EBI)
NM_011588 (RefSeq)
rat Trim28 116698 (Entrez Gene)
Chr1 q12 O08629 (UniProt | EBI)
NM_053916 (RefSeq)
cattle TRIM28 519422 (Entrez Gene)
Chr18 NP_001193738 (RefSeq)
NM_001206809 (RefSeq)
dog TRIM28 403689 (Entrez Gene)
Chr1 XP_013970333 (RefSeq)
frog, western clawed trim28 100489687 (Entrez Gene)
Chr7 XP_012822858 (RefSeq)
macaque, rhesus TRIM28 711982 (Entrez Gene)
Chr19 XP_028694650 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/26/2019
MGI 6.14
The Jackson Laboratory