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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
21145

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human KRT16 HGNC:6423 (HGNC)
3868 (Entrez Gene)
148067 (OMIM)
HGNC homology
Chr17 q21.2 Chr17:41609778-41612827 (-)
GRCh38.p2
Pachyonychia Congenita 1; PC1
Palmoplantar Keratoderma, Nonepidermolytic, Focal 1; FNEPPK1
P08779 (UniProt | EBI)
NM_005557 (RefSeq)
mouse Krt16 MGI:96690 (MGI)
16666 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr11 63.44 cM Chr11:100246091-100248902 (-)
GRCm38
Pachyonychia Congenita 1; PC1
Palmoplantar Keratoderma, Nonepidermolytic, Focal 1; FNEPPK1
OTTMUSG00000002540 (VEGA)
OTTMUSP00000002391 (VEGA)
OTTMUST00000004966 (VEGA)
rat Krt16 303530 (Entrez Gene)
Chr10 q32.1 NP_001008752 (RefSeq)
NM_001008752 (RefSeq)
chimpanzee KRT16 100240746 (Entrez Gene)
Chr17 NP_001138310 (RefSeq)
NM_001144838 (RefSeq)
rhesus macaque LOC707236 707236 (Entrez Gene)
Chr16 XP_002800548 (RefSeq)
cattle KRT16 100138169 (Entrez Gene)
Chr19 XP_010814593 (RefSeq)
dog KRT16 490978 (Entrez Gene)
Chr9 XP_548101 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory