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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ABCA1 HGNC:29 (HGNC)
19 (Entrez Gene)
600046 (OMIM)
ABCA1 (MyGene.info)
HGNC homology
Chr9 q31.1 Chr9:104781002-104928246 (-)
familial hypercholesterolemia
Tangier disease
O95477 (UniProt | EBI)
NM_005502 (RefSeq)
mouse Abca1 MGI:99607 (MGI)
11303 (Entrez Gene)
Gene Tree
HGNC homology
Chr4 28.57 cM Chr4:53030787-53159895 (-)
Tangier disease
ENSMUSG00000015243 (Ensembl Gene Model)
ENSMUSP00000030010 (Ensembl)
ENSMUST00000030010 (Ensembl)
rat Abca1 313210 (Entrez Gene)
Chr5 q23-q24 NP_835196 (RefSeq)
NM_178095 (RefSeq)
chimpanzee ABCA1 464630 (Entrez Gene)
Chr9 XP_001138040 (RefSeq)
cattle ABCA1 535379 (Entrez Gene)
Chr8 NP_001019864 (RefSeq)
NM_001024693 (RefSeq)
dog ABCA1 481651 (Entrez Gene)
Chr11 XP_022281376 (RefSeq)
chicken ABCA1 373945 (Entrez Gene)
ChrZ NP_989476 (RefSeq)
NM_204145 (RefSeq)
zebrafish abca1a 558924 (Entrez Gene)
Chr1 NP_001296394 (RefSeq)
NM_001309465 (RefSeq)
abca1b 100136868 (Entrez Gene)
Chr14 NP_001108058 (RefSeq)
NM_001114586 (RefSeq)
frog, western clawed abca1 100491942 (Entrez Gene)
Chr1 XP_004910916 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.14
The Jackson Laboratory