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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
21127

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC17A4 HGNC:10932 (HGNC)
10050 (Entrez Gene)
604216 (OMIM)
HGNC homology
Chr6 p22.2 Chr6:25754673-25781175 (+)
GRCh38.p7
Q9Y2C5 (UniProt | EBI)
NM_001286121 (RefSeq)
mouse Slc17a4 MGI:2442850 (MGI)
319848 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr13 9.98 cM Chr13:23897879-23915009 (-)
GRCm38
319848 (NCBI Gene Model)
Q5NCM1 (UniProt | EBI)
NM_177016 (RefSeq)
rat Slc17a4 679784 (Entrez Gene)
Chr17 p11 NP_001258143 (RefSeq)
NM_001271214 (RefSeq)
chimpanzee SLC17A4 471870 (Entrez Gene)
Chr6 XP_016810502 (RefSeq)
cattle SLC17A4 512725 (Entrez Gene)
Chr23 XP_015315475 (RefSeq)
dog SLC17A4 100688596 (Entrez Gene)
Chr35 XP_013966105 (RefSeq)
macaque, rhesus SLC17A4 694213 (Entrez Gene)
Chr4 XP_001082785 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/26/2019
MGI 6.14
The Jackson Laboratory