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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
21095

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human XCR1 HGNC:1625 (HGNC)
2829 (Entrez Gene)
600552 (OMIM)
Chr3 p21.3 Chr3:46020799-46027487 (-)
GRCh38
P46094 (UniProt | EBI)
NM_001024644 (RefSeq)
mouse Xcr1 MGI:1346338 (MGI)
23832 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 74.71 cM Chr9:123852315-123862029 (-)
GRCm38
OTTMUSG00000043096 (VEGA)
OTTMUSP00000063318 (VEGA)
OTTMUST00000113091 (VEGA)
rat Xcr1 301086 (Entrez Gene)
Chr8 q32 NP_001100341 (RefSeq)
NM_001106871 (RefSeq)
chimpanzee XCR1 460321 (Entrez Gene)
Chr3 XP_001148795 (RefSeq)
rhesus macaque XCR1 713622 (Entrez Gene)
Chr2 XP_001114260 (RefSeq)
cattle XCR1 617880 (Entrez Gene)
Chr22 NP_001181894 (RefSeq)
NM_001194965 (RefSeq)
dog XCR1 484792 (Entrez Gene)
Chr20 XP_005632689 (RefSeq)
chicken XCR1 428452 (Entrez Gene)
Chr2 NP_001039303 (RefSeq)
NM_001045838 (RefSeq)
zebrafish LOC793148 793148 (Entrez Gene)
Chr23 XP_005174203 (RefSeq)
LOC793479 793479 (Entrez Gene)
Chr23 XP_001333240 (RefSeq)
LOC100329796 100329796 (Entrez Gene)
Chr2 XP_002667429 (RefSeq)
xcr1a 553500 (Entrez Gene)
Chr23 XP_001332348 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory