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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
21092

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GNAT2 HGNC:4394 (HGNC)
2780 (Entrez Gene)
139340 (OMIM)
Chr1 p13.1 Chr1:109603267-109613083 (-)
GRCh38
Achromatopsia 4; ACHM4
P19087 (UniProt | EBI)
NM_005272 (RefSeq)
mouse Gnat2 MGI:95779 (MGI)
14686 (Entrez Gene)
Gene Tree
VISTA-Point
Chr3 46.83 cM Chr3:108092789-108101432 (+)
GRCm38
Achromatopsia 4; ACHM4
OTTMUSG00000007183 (VEGA)
OTTMUSP00000007612 (VEGA)
OTTMUST00000016571 (VEGA)
chimpanzee GNAT2 469402 (Entrez Gene)
Chr1 XP_524787 (RefSeq)
rhesus macaque GNAT2 699442 (Entrez Gene)
Chr1 XP_001091580 (RefSeq)
dog GNAT2 490119 (Entrez Gene)
Chr6 XP_547240 (RefSeq)
chicken GNAT2 395425 (Entrez Gene)
ChrUN NP_990021 (RefSeq)
NM_204690 (RefSeq)
zebrafish gnat2 140429 (Entrez Gene)
Chr8 NP_571944 (RefSeq)
NM_131869 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory