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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human FOXC2 HGNC:3801 (HGNC)
2303 (Entrez Gene)
602402 (OMIM)
HGNC homology
Chr16 q24.1 Chr16:86567251-86568933 (+)
Lymphedema-Distichiasis Syndrome
Q99958 (UniProt | EBI)
NM_005251 (RefSeq)
mouse Foxc2 MGI:1347481 (MGI)
14234 (Entrez Gene)
Gene Tree
HGNC homology
Chr8 70.33 cM Chr8:121116171-121118895 (+)
Lymphedema-Distichiasis Syndrome
OTTMUSG00000043022 (VEGA)
OTTMUSP00000063255 (VEGA)
OTTMUST00000112934 (VEGA)
rat Foxc2 171356 (Entrez Gene)
Chr19 Q63246 (UniProt | EBI)
NM_001101680 (RefSeq)
chimpanzee FOXC2 468058 (Entrez Gene)
Chr16 XP_009429683 (RefSeq)
rhesus macaque FOXC2 694852 (Entrez Gene)
Chr20 NP_001185637 (RefSeq)
NM_001198708 (RefSeq)
cattle FOXC2 507300 (Entrez Gene)
Chr18 NP_001180001 (RefSeq)
NM_001193072 (RefSeq)
dog FOXC2 489671 (Entrez Gene)
Chr5 XP_013969434 (RefSeq)
chicken FOXC2 396039 (Entrez Gene)
Chr2 NP_990469 (RefSeq)
NM_205138 (RefSeq)
western clawed frog foxc2 407875 (Entrez Gene)
ChrUN Q6NVT7 (UniProt | EBI)
NM_213692 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.01
The Jackson Laboratory