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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
21069

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC12A6 HGNC:10914 (HGNC)
9990 (Entrez Gene)
604878 (OMIM)
Chr15 q13 Chr15:34229996-34338064 (-)
GRCh38
Agenesis of the Corpus Callosum with Peripheral Neuropathy; ACCPN
Q9UHW9 (UniProt | EBI)
NM_005135 (RefSeq)
mouse Slc12a6 MGI:2135960 (MGI)
107723 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 56.99 cM Chr2:112265825-112363163 (+)
GRCm38
Agenesis of the Corpus Callosum with Peripheral Neuropathy; ACCPN
OTTMUSG00000015141 (VEGA)
OTTMUSP00000016121 (VEGA)
OTTMUST00000035915 (VEGA)
rat Slc12a6 691209 (Entrez Gene)
Chr3 q34 NP_001103100 (RefSeq)
NM_001109630 (RefSeq)
chimpanzee SLC12A6 750207 (Entrez Gene)
Chr15 XP_001173480 (RefSeq)
rhesus macaque SLC12A6 697536 (Entrez Gene)
Chr7 XP_001086105 (RefSeq)
cattle SLC12A6 521217 (Entrez Gene)
Chr10 NP_001180045 (RefSeq)
NM_001193116 (RefSeq)
dog SLC12A6 478239 (Entrez Gene)
Chr30 XP_856607 (RefSeq)
western clawed frog slc12a6 780031 (Entrez Gene)
ChrUN NP_001072576 (RefSeq)
NM_001079108 (RefSeq)
zebrafish slc12a7b 567667 (Entrez Gene)
Chr24 XP_696060 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory