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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
21001

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human MMP20 HGNC:7167 (HGNC)
9313 (Entrez Gene)
604629 (OMIM)
Chr11 q22.3 Chr11:102576835-102625332 (-)
GRCh38
Amelogenesis Imperfecta, Hypomaturation Type, Iia2; AI2A2
O60882 (UniProt | EBI)
NM_004771 (RefSeq)
mouse Mmp20 MGI:1353466 (MGI)
30800 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 2.46 cM Chr9:7628231-7674968 (+)
GRCm38
Amelogenesis Imperfecta, Hypomaturation Type, Iia2; AI2A2
30800 (NCBI Gene Model)
P57748 (UniProt | EBI)
NM_013903 (RefSeq)
rat Mmp20 300341 (Entrez Gene)
Chr8 q11 NP_001100270 (RefSeq)
NM_001106800 (RefSeq)
chimpanzee MMP20 740407 (Entrez Gene)
Chr11 XP_001153208 (RefSeq)
rhesus macaque MMP20 703188 (Entrez Gene)
Chr14 NP_001181006 (RefSeq)
NM_001194077 (RefSeq)
cattle MMP20 281916 (Entrez Gene)
Chr15 O18767 (UniProt | EBI)
NM_174391 (RefSeq)
dog MMP20 611829 (Entrez Gene)
Chr5 XP_854639 (RefSeq)
western clawed frog mmp20 100489409 (Entrez Gene)
ChrUN XP_002934967 (RefSeq)
zebrafish mmp20a 100329766 (Entrez Gene)
Chr15 XP_009290028 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory