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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20944

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GPC3 HGNC:4451 (HGNC)
2719 (Entrez Gene)
300037 (OMIM)
ChrX q26.1 ChrX:133535745-133985646 (-)
GRCh38
Simpson-Golabi-Behmel Syndrome, Type 1; SGBS1
Wilms Tumor 1; WT1
P51654 (UniProt | EBI)
NM_004484 (RefSeq)
mouse Gpc3 MGI:104903 (MGI)
14734 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 28.74 cM ChrX:52272426-52613950 (-)
GRCm38
Simpson-Golabi-Behmel Syndrome, Type 1; SGBS1
OTTMUSG00000017333 (VEGA)
OTTMUSP00000018969 (VEGA)
OTTMUST00000042115 (VEGA)
rat Gpc3 25236 (Entrez Gene)
ChrX q36 P13265 (UniProt | EBI)
NM_012774 (RefSeq)
chimpanzee GPC3 465866 (Entrez Gene)
ChrX A5A6P7 (UniProt | EBI)
NM_001135737 (RefSeq)
rhesus macaque GPC3 706773 (Entrez Gene)
ChrX XP_001097558 (RefSeq)
cattle GPC3 615239 (Entrez Gene)
ChrX NP_001030540 (RefSeq)
NM_001035463 (RefSeq)
dog GPC3 481056 (Entrez Gene)
ChrX XP_538178 (RefSeq)
chicken GPC3 770863 (Entrez Gene)
Chr4 XP_001232892 (RefSeq)
western clawed frog gpc3 100135027 (Entrez Gene)
ChrUN XP_002932665 (RefSeq)
zebrafish gpc3 387365 (Entrez Gene)
Chr14 XP_688014 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory