About   Help   FAQ
Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20917

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
select all deselect all Go
human CDH1 HGNC:1748 (HGNC)
999 (Entrez Gene)
192090 (OMIM)
Chr16 q22.1 Chr16:68737292-68835541 (+)
GRCh38
Breast Cancer
Endometrial Cancer
Gastric Cancer, Hereditary Diffuse; HDGC
Ovarian Cancer
Prostate Cancer
P12830 (UniProt | EBI)
NM_004360 (RefSeq)
mouse Cdh1 MGI:88354 (MGI)
12550 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 53.18 cM Chr8:106603351-106670246 (+)
GRCm38
OTTMUSG00000020588 (VEGA)
OTTMUSP00000022465 (VEGA)
OTTMUST00000048788 (VEGA)
rat Cdh1 83502 (Entrez Gene)
Chr19 q12 Q9R0T4 (UniProt | EBI)
NM_031334 (RefSeq)
chimpanzee CDH1 468009 (Entrez Gene)
Chr16 XP_001168150 (RefSeq)
rhesus macaque CDH1 704387 (Entrez Gene)
Chr20 XP_002802562 (RefSeq)
cattle CDH1 282637 (Entrez Gene)
Chr18 Q6R8F2 (UniProt | EBI)
NM_001002763 (RefSeq)
dog CDH1 442858 (Entrez Gene)
Chr5 F1PAA9 (UniProt | EBI)
NM_001287125 (RefSeq)
chicken CDH1 415860 (Entrez Gene)
Chr11 P08641 (UniProt | EBI)
NM_001039258 (RefSeq)
western clawed frog LOC100485633 100485633 (Entrez Gene)
ChrUN XP_002936044 (RefSeq)
zebrafish cdh1 114424 (Entrez Gene)
Chr7 NP_571895 (RefSeq)
NM_131820 (RefSeq)
LOC568392 568392 (Entrez Gene)
Chr7 XP_696808 (RefSeq)
si:busm1-71b9.3 568436 (Entrez Gene)
Chr7 XP_005166661 (RefSeq)
si:ch211-206i14.2 567602 (Entrez Gene)
Chr7 XP_695998 (RefSeq)
si:dkey-173l11.3 100329859 (Entrez Gene)
Chr7
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
12/16/2014
MGI 5.20
The Jackson Laboratory