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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20902

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RAB3D HGNC:9779 (HGNC)
9545 (Entrez Gene)
604350 (OMIM)
Chr19 p13.2 Chr19:11322046-11339668 (-)
GRCh38
O95716 (UniProt | EBI)
NM_004283 (RefSeq)
mouse Rab3d MGI:97844 (MGI)
19340 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 7.91 cM Chr9:21907491-21918192 (-)
GRCm38
OTTMUSG00000031911 (VEGA)
OTTMUSP00000042158 (VEGA)
OTTMUST00000079124 (VEGA)
rat Rab3d 140665 (Entrez Gene)
Chr8 q13 Q63942 (UniProt | EBI)
NM_080580 (RefSeq)
chimpanzee RAB3D 746353 (Entrez Gene)
Chr19 XP_009432986 (RefSeq)
rhesus macaque RAB3D 714222 (Entrez Gene)
Chr19 NP_001181198 (RefSeq)
NM_001194269 (RefSeq)
cattle RAB3D 100139105 (Entrez Gene)
Chr7 NP_001178304 (RefSeq)
NM_001191375 (RefSeq)
dog RAB3D 476708 (Entrez Gene)
Chr20 XP_533913 (RefSeq)
western clawed frog rab3d 448064 (Entrez Gene)
ChrUN NP_001005621 (RefSeq)
NM_001005621 (RefSeq)
zebrafish rab3da 567288 (Entrez Gene)
Chr1 NP_001139069 (RefSeq)
NM_001145597 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory