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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20885

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SEMA3F HGNC:10728 (HGNC)
6405 (Entrez Gene)
601124 (OMIM)
Chr3 p21.3 Chr3:50155411-50189075 (+)
GRCh38
Q13275 (UniProt | EBI)
NM_004186 (RefSeq)
mouse Sema3f MGI:1096347 (MGI)
20350 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 58.91 cM Chr9:107681502-107710475 (-)
GRCm38
20350 (NCBI Gene Model)
O88632 (UniProt | EBI)
NM_011349 (RefSeq)
rat Sema3f 315996 (Entrez Gene)
Chr8 q32 NP_001101655 (RefSeq)
NM_001108185 (RefSeq)
chimpanzee SEMA3F 460387 (Entrez Gene)
Chr3 XP_003309850 (RefSeq)
rhesus macaque SEMA3F 703995 (Entrez Gene)
Chr2 XP_001103281 (RefSeq)
cattle SEMA3F 531141 (Entrez Gene)
Chr22 XP_609627 (RefSeq)
dog SEMA3F 484763 (Entrez Gene)
Chr20 XP_541879 (RefSeq)
chicken SEMA3F 374109 (Entrez Gene)
Chr12 NP_989589 (RefSeq)
NM_204258 (RefSeq)
western clawed frog sema3f 496575 (Entrez Gene)
ChrUN NP_001011157 (RefSeq)
NM_001011157 (RefSeq)
zebrafish sema3fa 544658 (Entrez Gene)
Chr6 NP_001014822 (RefSeq)
NM_001014822 (RefSeq)
sema3fb 799945 (Entrez Gene)
Chr11 XP_001921106 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory