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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC1A3 HGNC:10941 (HGNC)
6507 (Entrez Gene)
600111 (OMIM)
HGNC homology
Chr5 p13.2 Chr5:36606355-36688334 (+)
episodic ataxia type 6
P43003 (UniProt | EBI)
NM_001166696 (RefSeq)
mouse Slc1a3 MGI:99917 (MGI)
20512 (Entrez Gene)
Gene Tree
HGNC homology
Chr15 3.82 cM Chr15:8634124-8710764 (-)
low tension glaucoma
ENSMUSG00000005360 (Ensembl Gene Model)
ENSMUSP00000005493 (Ensembl)
ENSMUST00000005493 (Ensembl)
rat Slc1a3 29483 (Entrez Gene)
Chr2 q16 P24942 (UniProt | EBI)
NM_001289941 (RefSeq)
chimpanzee SLC1A3 461918 (Entrez Gene)
Chr5 XP_001146398 (RefSeq)
cattle SLC1A3 282354 (Entrez Gene)
Chr20 P46411 (UniProt | EBI)
NM_174600 (RefSeq)
dog SLC1A3 403748 (Entrez Gene)
Chr4 NP_001003136 (RefSeq)
NM_001003136 (RefSeq)
chicken SLC1A3 395443 (Entrez Gene)
ChrZ XP_425011 (RefSeq)
zebrafish slc1a3a 323439 (Entrez Gene)
Chr5 NP_997805 (RefSeq)
NM_212640 (RefSeq)
slc1a3b 556181 (Entrez Gene)
Chr10 NP_001177232 (RefSeq)
NM_001190303 (RefSeq)
frog, western clawed slc1a3 100127700 (Entrez Gene)
Chr1 NP_001106687 (RefSeq)
NM_001113216 (RefSeq)
macaque, rhesus SLC1A3 701109 (Entrez Gene)
Chr6 NP_001252995 (RefSeq)
NM_001266066 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.13
The Jackson Laboratory