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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20868

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human COCH HGNC:2180 (HGNC)
1690 (Entrez Gene)
603196 (OMIM)
Chr14 q11.2-q13 Chr14:30874535-30895079 (+)
GRCh38
Deafness, Autosomal Dominant 9; DFNA9
O43405 (UniProt | EBI)
NM_004086 (RefSeq)
mouse Coch MGI:1278313 (MGI)
12810 (Entrez Gene)
Gene Tree
VISTA-Point
Chr12 22.11 cM Chr12:51593341-51605773 (+)
GRCm38
Deafness, Autosomal Dominant 9; DFNA9
12810 (NCBI Gene Model)
Q62507 (UniProt | EBI)
NM_007728 (RefSeq)
chimpanzee COCH 452837 (Entrez Gene)
Chr14 XP_001171057 (RefSeq)
rhesus macaque COCH 717114 (Entrez Gene)
Chr7 NP_001247492 (RefSeq)
NM_001260563 (RefSeq)
cattle COCH 504316 (Entrez Gene)
Chr21 Q5EA64 (UniProt | EBI)
NM_001077842 (RefSeq)
dog COCH 490640 (Entrez Gene)
Chr8 XP_547762 (RefSeq)
chicken COCH 395779 (Entrez Gene)
Chr5 O42163 (UniProt | EBI)
NM_204937 (RefSeq)
western clawed frog coch 100497833 (Entrez Gene)
ChrUN XP_002932887 (RefSeq)
zebrafish coch 368851 (Entrez Gene)
Chr17 NP_001003823 (RefSeq)
NM_001003823 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory