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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20842

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RAB29 HGNC:9789 (HGNC)
8934 (Entrez Gene)
603949 (OMIM)
Chr1 q32 Chr1:205767986-205775487 (-)
GRCh38
O14966 (UniProt | EBI)
NM_003929 (RefSeq)
mouse Rab29 MGI:2385107 (MGI)
226422 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 57.21 cM Chr1:131867224-131872887 (+)
GRCm38
OTTMUSG00000017320 (VEGA)
OTTMUSP00000018926 (VEGA)
OTTMUST00000042094 (VEGA)
rat Rab7l1 171122 (Entrez Gene)
Chr13 Q63481 (UniProt | EBI)
NM_133590 (RefSeq)
chimpanzee RAB29 469654 (Entrez Gene)
Chr1 XP_001162387 (RefSeq)
rhesus macaque RAB7L1 697184 (Entrez Gene)
Chr1 NP_001247882 (RefSeq)
NM_001260953 (RefSeq)
cattle RAB7L1 539000 (Entrez Gene)
Chr16 NP_001092564 (RefSeq)
NM_001099094 (RefSeq)
dog RAB7L1 478945 (Entrez Gene)
Chr38 XP_536104 (RefSeq)
chicken RAB7L1 419836 (Entrez Gene)
Chr26 XP_417967 (RefSeq)
western clawed frog LOC100135159 100135159 (Entrez Gene)
ChrUN NP_001107338 (RefSeq)
NM_001113866 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory