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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20744

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PTP4A2 HGNC:9635 (HGNC)
8073 (Entrez Gene)
601584 (OMIM)
PTP4A2 (MyGene.info)
HGNC homology
Chr1 p35.2 Chr1:31906421-31942635 (-)
GRCh38.p7
Q12974 (UniProt | EBI)
NM_001195101 (RefSeq)
mouse Ptp4a2 MGI:1277117 (MGI)
19244 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr4 63.38 cM Chr4:129820204-129850003 (+)
GRCm38
19244 (NCBI Gene Model)
O70274 (UniProt | EBI)
NM_008974 (RefSeq)
rat Ptp4a2 85237 (Entrez Gene)
Chr5 Q6P9X4 (UniProt | EBI)
NM_053475 (RefSeq)
chimpanzee PTP4A2 454687 (Entrez Gene)
Chr1 XP_016813582 (RefSeq)
cattle PTP4A2 614435 (Entrez Gene)
Chr2 A2VDT1 (UniProt | EBI)
NM_001104998 (RefSeq)
dog PTP4A2 609835 (Entrez Gene)
Chr2 XP_852076 (RefSeq)
chicken PTP4A2 419649 (Entrez Gene)
Chr23 XP_015153331 (RefSeq)
zebrafish ptp4a2b 334483 (Entrez Gene)
Chr19 NP_001257469 (RefSeq)
NM_001270540 (RefSeq)
frog, western clawed ptp4a2 549961 (Entrez Gene)
Chr2 NP_001017207 (RefSeq)
NM_001017207 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory