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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20700

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TSPAN6 HGNC:11858 (HGNC)
7105 (Entrez Gene)
300191 (OMIM)
TSPAN6 (MyGene.info)
HGNC homology
ChrX q22.1 ChrX:100627108-100637104 (-)
GRCh38.p7
O43657 (UniProt | EBI)
NM_001278742 (RefSeq)
mouse Tspan6 MGI:1926264 (MGI)
56496 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
ChrX 55.47 cM ChrX:133891068-133898429 (-)
GRCm38
ENSMUSG00000067377 (Ensembl Gene Model)
ENSMUSP00000084838 (Ensembl)
ENSMUST00000087557 (Ensembl)
rat Tspan6 302313 (Entrez Gene)
ChrX q32 NP_001094142 (RefSeq)
NM_001100672 (RefSeq)
chimpanzee TSPAN6 473698 (Entrez Gene)
ChrX XP_016798800 (RefSeq)
cattle TSPAN6 514741 (Entrez Gene)
ChrX Q32KU6 (UniProt | EBI)
NM_001038109 (RefSeq)
dog TSPAN6 480981 (Entrez Gene)
ChrX XP_022271714 (RefSeq)
chicken TSPAN6 422262 (Entrez Gene)
Chr4 NP_001264532 (RefSeq)
NM_001277603 (RefSeq)
zebrafish tspan7 406802 (Entrez Gene)
Chr14 NP_999939 (RefSeq)
NM_214774 (RefSeq)
frog, western clawed tspan6 733938 (Entrez Gene)
Chr8 NP_001039117 (RefSeq)
NM_001045652 (RefSeq)
macaque, rhesus TSPAN6 703166 (Entrez Gene)
ChrX XP_028698086 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/05/2019
MGI 6.14
The Jackson Laboratory