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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CIITA HGNC:7067 (HGNC)
4261 (Entrez Gene)
600005 (OMIM)
CIITA (MyGene.info)
HGNC homology
Chr16 p13.13 Chr16:10866208-10941562 (+)
MHC class II deficiency
rheumatoid arthritis
P33076 (UniProt | EBI)
NM_001379333 (RefSeq)
mouse Ciita MGI:108445 (MGI)
12265 (Entrez Gene)
Gene Tree
HGNC homology
Chr16 5.65 cM Chr16:10480059-10528418 (+)
MHC class II deficiency
ENSMUSG00000022504 (Ensembl Gene Model)
ENSMUSP00000155517 (Ensembl)
ENSMUST00000230395 (Ensembl)
rat Ciita 85483 (Entrez Gene)
Chr10 q11 NP_001257733 (RefSeq)
NM_053529 (RefSeq)
chimpanzee CIITA 453914 (Entrez Gene)
Chr16 XP_016784896 (RefSeq)
cattle CIITA 508720 (Entrez Gene)
Chr25 XP_010817560 (RefSeq)
dog CIITA 490008 (Entrez Gene)
Chr6 XP_005621603 (RefSeq)
chicken CIITA 416633 (Entrez Gene)
Chr14 XP_414932 (RefSeq)
zebrafish ciita 100003537 (Entrez Gene)
Chr3 XP_001343072 (RefSeq)
frog, western clawed ciita 101734303 (Entrez Gene)
Chr9 XP_017952759 (RefSeq)
macaque, rhesus CIITA 710761 (Entrez Gene)
Chr20 XP_014981099 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.16
The Jackson Laboratory