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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20659

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC7A2 HGNC:11060 (HGNC)
6542 (Entrez Gene)
601872 (OMIM)
Chr8 p22 Chr8:17497088-17570568 (+)
GRCh38
P52569 (UniProt | EBI)
NM_001008539 (RefSeq)
mouse Slc7a2 MGI:99828 (MGI)
11988 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 23.89 cM Chr8:40862396-40922308 (+)
GRCm38
OTTMUSG00000031635 (VEGA)
OTTMUSP00000041669 (VEGA)
OTTMUST00000078365 (VEGA)
rat Slc7a2 64554 (Entrez Gene)
Chr16 q12.1 B5D5N9 (UniProt | EBI)
NM_022619 (RefSeq)
chimpanzee SLC7A2 740548 (Entrez Gene)
Chr8 XP_001142615 (RefSeq)
rhesus macaque SLC7A2 710629 (Entrez Gene)
Chr8 XP_002805317 (RefSeq)
cattle SLC7A2 538708 (Entrez Gene)
Chr27 XP_870661 (RefSeq)
dog SLC7A2 475614 (Entrez Gene)
Chr16 XP_848421 (RefSeq)
chicken SLC7A2 422730 (Entrez Gene)
Chr4 B3TP03 (UniProt | EBI)
NM_001199102 (RefSeq)
zebrafish slc7a2 494041 (Entrez Gene)
Chr14 Q5PR34 (UniProt | EBI)
NM_001008584 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory