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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2056

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PRKCSH HGNC:9411 (HGNC)
5589 (Entrez Gene)
177060 (OMIM)
PRKCSH (MyGene.info)
HGNC homology
Chr19 p13.2 Chr19:11435257-11450968 (+)
GRCh38.p7
polycystic liver disease
P14314 (UniProt | EBI)
NM_001001329 (RefSeq)
mouse Prkcsh MGI:107877 (MGI)
19089 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr9 8.04 cM Chr9:22002988-22014245 (+)
GRCm38
polycystic liver disease
19089 (NCBI Gene Model)
O08795 (UniProt | EBI)
NM_001293650 (RefSeq)
rat Prkcsh 300445 (Entrez Gene)
Chr8 q13 NP_001100276 (RefSeq)
NM_001106806 (RefSeq)
chimpanzee PRKCSH 455731 (Entrez Gene)
Chr19 XP_016790592 (RefSeq)
cattle PRKCSH 338067 (Entrez Gene)
Chr7 Q28034 (UniProt | EBI)
NM_176662 (RefSeq)
dog PRKCSH 484941 (Entrez Gene)
Chr20 XP_022262729 (RefSeq)
zebrafish prkcsh 394028 (Entrez Gene)
Chr3 NP_957347 (RefSeq)
NM_201053 (RefSeq)
frog, western clawed prkcsh 394983 (Entrez Gene)
Chr3 NP_989356 (RefSeq)
NM_204025 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/05/2017
MGI 6.11
The Jackson Laboratory