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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2055

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PRKD3 HGNC:9408 (HGNC)
23683 (Entrez Gene)
607077 (OMIM)
Chr2 p21 Chr2:37250502-37324772 (-)
GRCh38
O94806 (UniProt | EBI)
NM_005813 (RefSeq)
mouse Prkd3 MGI:1922542 (MGI)
75292 (Entrez Gene)
Gene Tree
VISTA-Point
Chr17 49.69 cM Chr17:78949405-79020816 (-)
GRCm38
OTTMUSG00000031058 (VEGA)
OTTMUSP00000040724 (VEGA)
OTTMUST00000077141 (VEGA)
rat Prkd3 313834 (Entrez Gene)
Chr6 q11 NP_001019434 (RefSeq)
NM_001024263 (RefSeq)
chimpanzee PRKD3 459158 (Entrez Gene)
Chr2A XP_001166998 (RefSeq)
rhesus macaque PRKD3 709647 (Entrez Gene)
Chr13 NP_001244477 (RefSeq)
NM_001257548 (RefSeq)
cattle PRKD3 538447 (Entrez Gene)
Chr11 NP_001192467 (RefSeq)
NM_001205538 (RefSeq)
dog PRKD3 483036 (Entrez Gene)
Chr17 XP_540151 (RefSeq)
chicken PRKD3 421478 (Entrez Gene)
Chr3 XP_419526 (RefSeq)
zebrafish prkd3 557337 (Entrez Gene)
Chr17 XP_685483 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory