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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20453

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CFD HGNC:2771 (HGNC)
1675 (Entrez Gene)
134350 (OMIM)
Chr19 p13.3 Chr19:859665-863624 (+)
GRCh38
Complement Factor D Deficiency; CFDD
P00746 (UniProt | EBI)
NM_001928 (RefSeq)
mouse Cfd MGI:87931 (MGI)
11537 (Entrez Gene)
Gene Tree
VISTA-Point
Chr10 39.72 cM Chr10:79890853-79892656 (+)
GRCm38
11537 (NCBI Gene Model)
P03953 (UniProt | EBI)
NM_013459 (RefSeq)
rat Cfd 54249 (Entrez Gene)
Chr7 q11 P32038 (UniProt | EBI)
NM_001077642 (RefSeq)
chimpanzee CFD 455533 (Entrez Gene)
Chr19 XP_003316020 (RefSeq)
rhesus macaque LOC721138 721138 (Entrez Gene)
Chr19 XP_001117186 (RefSeq)
cattle CFD 505647 (Entrez Gene)
Chr7 Q3T0A3 (UniProt | EBI)
NM_001034255 (RefSeq)
dog CFD 485095 (Entrez Gene)
Chr20 XP_542213 (RefSeq)
chicken CFD 100857593 (Entrez Gene)
Chr28 XP_003642908 (RefSeq)
western clawed frog cfd 394945 (Entrez Gene)
ChrUN Q6P326 (UniProt | EBI)
NM_203989 (RefSeq)
zebrafish cfd 553553 (Entrez Gene)
Chr13 NP_001018368 (RefSeq)
NM_001020532 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory