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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human COL9A3 HGNC:2219 (HGNC)
1299 (Entrez Gene)
120270 (OMIM)
COL9A3 (MyGene.info)
HGNC homology
Chr20 q13.33 Chr20:62817062-62841159 (+)
multiple epiphyseal dysplasia
Q14050 (UniProt | EBI)
NM_001853 (RefSeq)
mouse Col9a3 MGI:894686 (MGI)
12841 (Entrez Gene)
Gene Tree
HGNC homology
Chr2 103.14 cM Chr2:180597790-180622189 (+)
OTTMUSG00000016344 (VEGA)
OTTMUSP00000017558 (VEGA)
OTTMUST00000039291 (VEGA)
rat Col9a3 362285 (Entrez Gene)
Chr3 q43 XP_017458197 (RefSeq)
NM_001108611 (RefSeq)
chimpanzee COL9A3 745218 (Entrez Gene)
Chr20 XP_024207902 (RefSeq)
cattle COL9A3 789493 (Entrez Gene)
Chr13 XP_002692454 (RefSeq)
dog COL9A3 612430 (Entrez Gene)
Chr24 NP_001184100 (RefSeq)
NM_001197171 (RefSeq)
chicken COL9A3 396242 (Entrez Gene)
Chr20 P32017 (UniProt | EBI)
NM_205305 (RefSeq)
zebrafish col9a3 567110 (Entrez Gene)
Chr23 NP_001292502 (RefSeq)
NM_001305573 (RefSeq)
frog, western clawed col9a3 100145619 (Entrez Gene)
ChrUN NP_001120497 (RefSeq)
NM_001127025 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory