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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20438

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human COL9A3 HGNC:2219 (HGNC)
1299 (Entrez Gene)
120270 (OMIM)
Chr20 q13.3 Chr20:62817062-62841159 (+)
GRCh38
Epiphyseal Dysplasia, Multiple, 3; EDM3
Intervertebral Disc Disease; IDD
Q14050 (UniProt | EBI)
NM_001853 (RefSeq)
mouse Col9a3 MGI:894686 (MGI)
12841 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 103.14 cM Chr2:180597790-180622189 (+)
GRCm38
OTTMUSG00000016344 (VEGA)
OTTMUSP00000017558 (VEGA)
OTTMUST00000039291 (VEGA)
rat Col9a3 362285 (Entrez Gene)
Chr3 q43 XP_003749688 (RefSeq)
NM_001108611 (RefSeq)
chimpanzee COL9A3 745218 (Entrez Gene)
Chr20 XP_001150788 (RefSeq)
cattle COL9A3 789493 (Entrez Gene)
Chr13 XP_001787723 (RefSeq)
dog COL9A3 612430 (Entrez Gene)
Chr24 NP_001184100 (RefSeq)
NM_001197171 (RefSeq)
chicken COL9A3 396242 (Entrez Gene)
Chr20 P32017 (UniProt | EBI)
NM_205305 (RefSeq)
western clawed frog col9a3 100145619 (Entrez Gene)
ChrUN NP_001120497 (RefSeq)
NM_001127025 (RefSeq)
zebrafish col9a3 567110 (Entrez Gene)
Chr23 XP_695491 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory