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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20425

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CDH3 HGNC:1762 (HGNC)
1001 (Entrez Gene)
114021 (OMIM)
Chr16 q22.1 Chr16:68644248-68699054 (+)
GRCh38
EEM Syndrome
Hypotrichosis, Congenital, with Juvenile Macular Dystrophy; HJMD
P22223 (UniProt | EBI)
NM_001793 (RefSeq)
mouse Cdh3 MGI:88356 (MGI)
12560 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 53.16 cM Chr8:106510913-106556908 (+)
GRCm38
ENSMUSG00000061048 (Ensembl Gene Model)
ENSMUSP00000079613 (Ensembl)
ENSMUST00000080797 (Ensembl)
rat Cdh3 116777 (Entrez Gene)
Chr19 q12 NP_446390 (RefSeq)
NM_053938 (RefSeq)
chimpanzee CDH3 454192 (Entrez Gene)
Chr16 XP_001167910 (RefSeq)
cattle CDH3 281063 (Entrez Gene)
Chr18 P19535 (UniProt | EBI)
NM_001244605 (RefSeq)
dog CDH3 611010 (Entrez Gene)
Chr5 XP_853709 (RefSeq)
chicken CDH3 414845 (Entrez Gene)
Chr11 P33145 (UniProt | EBI)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory