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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20386

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human NDST1 HGNC:7680 (HGNC)
3340 (Entrez Gene)
600853 (OMIM)
Chr5 q33.1 Chr5:150485805-150558211 (+)
GRCh38
P52848 (UniProt | EBI)
NM_001543 (RefSeq)
mouse Ndst1 MGI:104719 (MGI)
15531 (Entrez Gene)
Gene Tree
VISTA-Point
Chr18 34.38 cM Chr18:60685978-60713389 (-)
GRCm38
Diaphragmatic Hernia, Congenital
DiGeorge Syndrome; DGS
Respiratory Distress Syndrome in Premature Infants
ENSMUSG00000054008 (Ensembl Gene Model)
ENSMUSP00000126623 (Ensembl)
ENSMUST00000169273 (Ensembl)
rat Ndst1 29633 (Entrez Gene)
Chr18 q12.1 Q02353 (UniProt | EBI)
NM_024361 (RefSeq)
chimpanzee NDST1 462194 (Entrez Gene)
Chr5 XP_001166515 (RefSeq)
rhesus macaque NDST1 712425 (Entrez Gene)
Chr6 NP_001253695 (RefSeq)
NM_001266766 (RefSeq)
cattle NDST1 514172 (Entrez Gene)
Chr7 NP_001179290 (RefSeq)
NM_001192361 (RefSeq)
dog NDST1 489185 (Entrez Gene)
Chr4 XP_546303 (RefSeq)
chicken NDST1 416274 (Entrez Gene)
Chr13 XP_414592 (RefSeq)
western clawed frog ndst1 496577 (Entrez Gene)
ChrUN Q5U4X8 (UniProt | EBI)
NM_001011159 (RefSeq)
zebrafish LOC100329944 100329944 (Entrez Gene)
Chr14 XP_002664339 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory