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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human FOXC1 HGNC:3800 (HGNC)
2296 (Entrez Gene)
601090 (OMIM)
Forkhead box C1 (MyGene.info)
HGNC homology
Chr6 p25.3 Chr6:1610446-1613897 (+)
Axenfeld-Rieger syndrome type 3
iridogoniodysgenesis syndrome
Q12948 (UniProt | EBI)
NM_001453 (RefSeq)
mouse Foxc1 MGI:1347466 (MGI)
17300 (Entrez Gene)
Gene Tree
HGNC homology
Chr13 13.52 cM Chr13:31806691-31810643 (+)
OTTMUSG00000000725 (VEGA)
OTTMUSP00000000642 (VEGA)
OTTMUST00000001359 (VEGA)
rat Foxc1 364706 (Entrez Gene)
Chr17 p12 NP_599165 (RefSeq)
NM_134338 (RefSeq)
chimpanzee FOXC1 750577 (Entrez Gene)
Chr6 XP_003311061 (RefSeq)
zebrafish foxc1a 100148408 (Entrez Gene)
Chr2 Q9DE25 (UniProt | EBI)
NM_131728 (RefSeq)
frog, western clawed foxc1 493250 (Entrez Gene)
Chr6 Q68F77 (UniProt | EBI)
NM_001007863 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory