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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
20262

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RARA HGNC:9864 (HGNC)
5914 (Entrez Gene)
180240 (OMIM)
Chr17 q21 Chr17:40309171-40357643 (+)
GRCh38
Acute Promyelocytic Leukemia; APL
P10276 (UniProt | EBI)
NM_000964 (RefSeq)
mouse Rara MGI:97856 (MGI)
19401 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 62.76 cM Chr11:98927818-98974942 (+)
GRCm38
OTTMUSG00000006440 (VEGA)
OTTMUSP00000006836 (VEGA)
OTTMUST00000014708 (VEGA)
rat Rara 24705 (Entrez Gene)
Chr10 q31 NP_113716 (RefSeq)
NM_031528 (RefSeq)
chimpanzee RARA 454647 (Entrez Gene)
Chr17 XP_003315498 (RefSeq)
rhesus macaque RARA 700206 (Entrez Gene)
Chr16 XP_002808174 (RefSeq)
cattle RARA 534280 (Entrez Gene)
Chr19 NP_001014942 (RefSeq)
NM_001014942 (RefSeq)
dog RARA 480526 (Entrez Gene)
Chr9 Q5FBR4 (UniProt | EBI)
NM_001012645 (RefSeq)
chicken RARA 395213 (Entrez Gene)
ChrUN Q90966 (UniProt | EBI)
NM_204536 (RefSeq)
zebrafish raraa 30680 (Entrez Gene)
Chr12 Q90271 (UniProt | EBI)
NM_131406 (RefSeq)
rarab 555364 (Entrez Gene)
Chr3 Q7ZTI3 (UniProt | EBI)
NM_131399 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory