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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RARA HGNC:9864 (HGNC)
5914 (Entrez Gene)
180240 (OMIM)
Retinoic acid receptor alpha (MyGene.info)
HGNC homology
Chr17 q21.2 Chr17:40309171-40357643 (+)
acute promyelocytic leukemia
P10276 (UniProt | EBI)
NM_001145302 (RefSeq)
mouse Rara MGI:97856 (MGI)
19401 (Entrez Gene)
Gene Tree
HGNC homology
Chr11 62.76 cM Chr11:98927818-98974942 (+)
ENSMUSG00000037992 (Ensembl Gene Model)
ENSMUSP00000103098 (Ensembl)
ENSMUST00000107474 (Ensembl)
rat Rara 24705 (Entrez Gene)
Chr10 q31 NP_113716 (RefSeq)
NM_031528 (RefSeq)
cattle RARA 534280 (Entrez Gene)
Chr19 NP_001014942 (RefSeq)
NM_001014942 (RefSeq)
dog RARA 480526 (Entrez Gene)
Chr9 Q5FBR4 (UniProt | EBI)
NM_001012645 (RefSeq)
chicken RARA 395213 (Entrez Gene)
Chr27 Q90966 (UniProt | EBI)
NM_204536 (RefSeq)
zebrafish raraa 30680 (Entrez Gene)
Chr12 Q90271 (UniProt | EBI)
NM_131406 (RefSeq)
rarab 555364 (Entrez Gene)
Chr3 Q7ZTI3 (UniProt | EBI)
NM_131399 (RefSeq)
frog, western clawed rara 100038052 (Entrez Gene)
Chr10 NP_001164665 (RefSeq)
NM_001171194 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.15
The Jackson Laboratory