About   Help   FAQ
HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20260

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
select all deselect all Go
human PTAFR HGNC:9582 (HGNC)
5724 (Entrez Gene)
173393 (OMIM)
HGNC homology
Chr1 p35.3 Chr1:28147166-28193936 (-)
GRCh38.p7
P25105 (UniProt | EBI)
NM_001164723 (RefSeq)
mouse Ptafr MGI:106066 (MGI)
19204 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr4 65.56 cM Chr4:132564067-132582683 (+)
GRCm38
19204 (NCBI Gene Model)
Q62035 (UniProt | EBI)
NM_001081211 (RefSeq)
rat Ptafr 58949 (Entrez Gene)
Chr5 q36 P46002 (UniProt | EBI)
NM_053321 (RefSeq)
chimpanzee PTAFR 469249 (Entrez Gene)
Chr1 XP_001152150 (RefSeq)
cattle PTAFR 518283 (Entrez Gene)
Chr2 Q9TTY5 (UniProt | EBI)
NM_001040538 (RefSeq)
dog PTAFR 487336 (Entrez Gene)
Chr2 NP_001273976 (RefSeq)
NM_001287047 (RefSeq)
chicken PTAFR 428209 (Entrez Gene)
Chr23 XP_024998886 (RefSeq)
zebrafish ptafr 100002627 (Entrez Gene)
Chr17 XP_001342372 (RefSeq)
frog, western clawed ptafr 493365 (Entrez Gene)
Chr2 NP_001008003 (RefSeq)
NM_001008002 (RefSeq)
macaque, rhesus PTAFR 716788 (Entrez Gene)
Chr1 P35366 (UniProt | EBI)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
02/12/2019
MGI 6.13
The Jackson Laboratory