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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
20253

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human OPRK1 HGNC:8154 (HGNC)
4986 (Entrez Gene)
165196 (OMIM)
Chr8 q11.2 Chr8:53225716-53251697 (-)
GRCh38
P41145 (UniProt | EBI)
NM_000912 (RefSeq)
mouse Oprk1 MGI:97439 (MGI)
18387 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 1.89 cM Chr1:5588493-5606131 (+)
GRCm38
OTTMUSG00000034734 (VEGA)
OTTMUSP00000048083 (VEGA)
OTTMUST00000088255 (VEGA)
rat Oprk1 29335 (Entrez Gene)
Chr5 q12 P34975 (UniProt | EBI)
NM_017167 (RefSeq)
chimpanzee OPRK1 472761 (Entrez Gene)
Chr8 XP_003311840 (RefSeq)
rhesus macaque OPRK1 710783 (Entrez Gene)
Chr8 XP_002805382 (RefSeq)
dog OPRK1 486951 (Entrez Gene)
Chr29 XP_544080 (RefSeq)
chicken OPRK1 428533 (Entrez Gene)
Chr2 XP_426087 (RefSeq)
zebrafish oprk1 360139 (Entrez Gene)
Chr2 NP_878306 (RefSeq)
NM_182886 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory