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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20243

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HTR4 HGNC:5299 (HGNC)
3360 (Entrez Gene)
602164 (OMIM)
Chr5 q31-q33 Chr5:148451032-148654527 (-)
GRCh38
Q13639 (UniProt | EBI)
NM_000870 (RefSeq)
mouse Htr4 MGI:109246 (MGI)
15562 (Entrez Gene)
Gene Tree
VISTA-Point
Chr18 35.1 cM Chr18:62324204-62467802 (+)
GRCm38
15562 (NCBI Gene Model)
P97288 (UniProt | EBI)
NM_008313 (RefSeq)
rat Htr4 25324 (Entrez Gene)
Chr18 q12.1 Q62758 (UniProt | EBI)
NM_012853 (RefSeq)
chimpanzee HTR4 462175 (Entrez Gene)
Chr5 XP_001162258 (RefSeq)
rhesus macaque HTR4 710046 (Entrez Gene)
Chr6 XP_001105153 (RefSeq)
cattle HTR4 317708 (Entrez Gene)
Chr7 NP_001035575 (RefSeq)
NM_001040485 (RefSeq)
dog HTR4 489198 (Entrez Gene)
Chr4 XP_005619376 (RefSeq)
chicken HTR4 416150 (Entrez Gene)
Chr13 XP_414481 (RefSeq)
western clawed frog LOC100493952 100493952 (Entrez Gene)
ChrUN XP_002939852 (RefSeq)
zebrafish LOC556843 556843 (Entrez Gene)
Chr14 XP_684857 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory