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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20240

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HTR1D HGNC:5289 (HGNC)
3352 (Entrez Gene)
182133 (OMIM)
Chr1 p36.3-p34.3 Chr1:23191895-23194729 (-)
GRCh38
P28221 (UniProt | EBI)
NM_000864 (RefSeq)
mouse Htr1d MGI:96276 (MGI)
15552 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 68.74 cM Chr4:136423524-136444398 (+)
GRCm38
OTTMUSG00000009699 (VEGA)
OTTMUSP00000036224 (VEGA)
OTTMUST00000070934 (VEGA)
rat Htr1d 25323 (Entrez Gene)
Chr5 q36 P28565 (UniProt | EBI)
NM_012852 (RefSeq)
chimpanzee HTR1D 469219 (Entrez Gene)
Chr1 XP_524604 (RefSeq)
rhesus macaque HTR1D 709379 (Entrez Gene)
Chr1 XP_001102386 (RefSeq)
cattle HTR1D 407136 (Entrez Gene)
Chr2 XP_005197662 (RefSeq)
chicken HTR1D 769107 (Entrez Gene)
Chr23 XP_003642607 (RefSeq)
western clawed frog htr1d 100494760 (Entrez Gene)
ChrUN XP_002938881 (RefSeq)
zebrafish htr1d 556429 (Entrez Gene)
Chr17 NP_001139158 (RefSeq)
NM_001145686 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory