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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20185

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CACNA1E HGNC:1392 (HGNC)
777 (Entrez Gene)
601013 (OMIM)
Chr1 q25.3 Chr1:181483550-181806784 (+)
GRCh38
Q15878 (UniProt | EBI)
NM_000721 (RefSeq)
mouse Cacna1e MGI:106217 (MGI)
12290 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 66.14 cM Chr1:154392519-154725920 (-)
GRCm38
12290 (NCBI Gene Model)
Q61290 (UniProt | EBI)
NM_009782 (RefSeq)
rat Cacna1e 54234 (Entrez Gene)
Chr13 q21 Q07652 (UniProt | EBI)
NM_019294 (RefSeq)
chimpanzee CACNA1E 457564 (Entrez Gene)
Chr1 XP_003949701 (RefSeq)
rhesus macaque CACNA1E 718092 (Entrez Gene)
Chr1 XP_001110352 (RefSeq)
cattle CACNA1E 353113 (Entrez Gene)
Chr16 NP_001178052 (RefSeq)
NM_001191123 (RefSeq)
dog CACNA1E 490305 (Entrez Gene)
Chr7 XP_547425 (RefSeq)
chicken CACNA1E 424412 (Entrez Gene)
Chr8 XP_422255 (RefSeq)
zebrafish LOC564274 564274 (Entrez Gene)
Chr8 XP_001920777 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory