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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20184

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CACNA1B HGNC:1389 (HGNC)
774 (Entrez Gene)
601012 (OMIM)
Chr9 q34 Chr9:137877789-138124624 (+)
GRCh38
Q00975 (UniProt | EBI)
NM_000718 (RefSeq)
mouse Cacna1b MGI:88296 (MGI)
12287 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 16.58 cM Chr2:24603887-24763152 (-)
GRCm38
OTTMUSG00000012011 (VEGA)
OTTMUSP00000013174 (VEGA)
OTTMUST00000029152 (VEGA)
rat Cacna1b 257648 (Entrez Gene)
Chr3 p13 Q02294 (UniProt | EBI)
NM_147141 (RefSeq)
chimpanzee CACNA1B 464893 (Entrez Gene)
Chr9 XP_520396 (RefSeq)
dog CACNA1B 480660 (Entrez Gene)
Chr9 XP_005625483 (RefSeq)
chicken CACNA1B 374169 (Entrez Gene)
Chr17 O73706 (UniProt | EBI)
NM_204293 (RefSeq)
zebrafish cacna1ba 555941 (Entrez Gene)
Chr5 NP_001108020 (RefSeq)
NM_001114548 (RefSeq)
cacna1bb 562796 (Entrez Gene)
Chr21 XP_002665969 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/23/2014
MGI 5.19
The Jackson Laboratory