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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20148

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HTR1A HGNC:5286 (HGNC)
3350 (Entrez Gene)
109760 (OMIM)
Chr5 q11.2-q13 Chr5:63960048-63962292 (-)
GRCh38
Periodic Fever, Menstrual Cycle-Dependent
P08908 (UniProt | EBI)
NM_000524 (RefSeq)
mouse Htr1a MGI:96273 (MGI)
15550 (Entrez Gene)
Gene Tree
VISTA-Point
Chr13 56.92 cM Chr13:105443693-105448133 (+)
GRCm38
Anxiety
15550 (NCBI Gene Model)
Q64264 (UniProt | EBI)
NM_008308 (RefSeq)
rat Htr1a 24473 (Entrez Gene)
Chr2 q16 P19327 (UniProt | EBI)
NM_012585 (RefSeq)
chimpanzee HTR1A 471533 (Entrez Gene)
Chr5 Q9N298 (UniProt | EBI)
NM_001135622 (RefSeq)
rhesus macaque HTR1A 694991 (Entrez Gene)
Chr6 NP_001185629 (RefSeq)
NM_001198700 (RefSeq)
cattle HTR1A 407137 (Entrez Gene)
Chr20 XP_600535 (RefSeq)
dog HTR1A 487230 (Entrez Gene)
Chr2 Q6XXX9 (UniProt | EBI)
NM_001012397 (RefSeq)
chicken HTR1A 431581 (Entrez Gene)
ChrZ NP_001163999 (RefSeq)
NM_001170528 (RefSeq)
western clawed frog htr1a 100488829 (Entrez Gene)
ChrUN XP_004910432 (RefSeq)
zebrafish htr1aa 100001828 (Entrez Gene)
Chr8 NP_001116793 (RefSeq)
NM_001123321 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory