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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20104

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PKD2 HGNC:9009 (HGNC)
5311 (Entrez Gene)
173910 (OMIM)
Chr4 q22.1 Chr4:88007647-88077779 (+)
GRCh38
Polycystic Kidney Disease 2; PKD2
Q13563 (UniProt | EBI)
NM_000297 (RefSeq)
mouse Pkd2 MGI:1099818 (MGI)
18764 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 50.68 cM Chr5:104459450-104505819 (+)
GRCm38
Polycystic Kidney Disease 2; PKD2
OTTMUSG00000025951 (VEGA)
OTTMUSP00000031741 (VEGA)
OTTMUST00000064001 (VEGA)
rat Pkd2 498328 (Entrez Gene)
Chr14 p22 NP_001178863 (RefSeq)
NM_001191934 (RefSeq)
chimpanzee PKD2 461367 (Entrez Gene)
Chr4 XP_009446281 (RefSeq)
rhesus macaque PKD2 702179 (Entrez Gene)
Chr5 XP_001099242 (RefSeq)
cattle PKD2 530393 (Entrez Gene)
Chr6 Q4GZT3 (UniProt | EBI)
NM_001046312 (RefSeq)
dog PKD2 487852 (Entrez Gene)
Chr32 XP_544974 (RefSeq)
chicken PKD2 422585 (Entrez Gene)
Chr4 NP_001026311 (RefSeq)
NM_001031140 (RefSeq)
western clawed frog pkd2 100038156 (Entrez Gene)
ChrUN XP_002938673 (RefSeq)
zebrafish pkd2 432387 (Entrez Gene)
Chr1 NP_001002310 (RefSeq)
NM_001002310 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory