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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ITGA6 HGNC:6142 (HGNC)
3655 (Entrez Gene)
147556 (OMIM)
ITGA6 (MyGene.info)
HGNC homology
Chr2 q31.1 Chr2:172427354-172506455 (+)
junctional epidermolysis bullosa with pyloric atresia
P23229 (UniProt | EBI)
NM_001316306 (RefSeq)
mouse Itga6 MGI:96605 (MGI)
16403 (Entrez Gene)
Gene Tree
HGNC homology
Chr2 42.79 cM Chr2:71786886-71858427 (+)
junctional epidermolysis bullosa Herlitz type
16403 (NCBI Gene Model)
Q61739 (UniProt | EBI)
NM_008397 (RefSeq)
rat Itga6 114517 (Entrez Gene)
Chr3 q23 NP_446177 (RefSeq)
NM_053725 (RefSeq)
chimpanzee ITGA6 459742 (Entrez Gene)
Chr2B XP_003309464 (RefSeq)
cattle ITGA6 535043 (Entrez Gene)
Chr2 NP_001103451 (RefSeq)
NM_001109981 (RefSeq)
dog ITGA6 100856563 (Entrez Gene)
Chr36 XP_005640381 (RefSeq)
chicken ITGA6 396226 (Entrez Gene)
Chr7 P26007 (UniProt | EBI)
NM_205289 (RefSeq)
zebrafish itga6a 503893 (Entrez Gene)
Chr9 XP_005167466 (RefSeq)
frog, western clawed itga6 100497992 (Entrez Gene)
Chr9 XP_002934665 (RefSeq)
macaque, rhesus ITGA6 697643 (Entrez Gene)
Chr12 NP_001245046 (RefSeq)
NM_001258117 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.14
The Jackson Laboratory