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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20091

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ITGA6 HGNC:6142 (HGNC)
3655 (Entrez Gene)
147556 (OMIM)
Chr2 q31.1 Chr2:172427586-172506453 (+)
GRCh38
Epidermolysis Bullosa Junctionalis with Pyloric Atresia
P23229 (UniProt | EBI)
NM_000210 (RefSeq)
mouse Itga6 MGI:96605 (MGI)
16403 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 42.79 cM Chr2:71745616-71858416 (+)
GRCm38
Epidermolysis Bullosa, Junctional, Herlitz Type
OTTMUSG00000013266 (VEGA)
OTTMUSP00000014264 (VEGA)
OTTMUST00000032064 (VEGA)
rat Itga6 114517 (Entrez Gene)
Chr3 q22 NP_446177 (RefSeq)
NM_053725 (RefSeq)
chimpanzee ITGA6 459742 (Entrez Gene)
Chr2B XP_515909 (RefSeq)
rhesus macaque ITGA6 697643 (Entrez Gene)
Chr12 NP_001245046 (RefSeq)
NM_001258117 (RefSeq)
cattle ITGA6 535043 (Entrez Gene)
Chr2 NP_001103451 (RefSeq)
NM_001109981 (RefSeq)
dog ITGA6 100856563 (Entrez Gene)
Chr36 XP_003640224 (RefSeq)
chicken ITGA6 396226 (Entrez Gene)
Chr7 P26007 (UniProt | EBI)
NM_205289 (RefSeq)
western clawed frog itga6 100497992 (Entrez Gene)
ChrUN XP_002934665 (RefSeq)
zebrafish itga6a 503893 (Entrez Gene)
Chr9 XP_005167466 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory