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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
20071

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human COL4A4 HGNC:2206 (HGNC)
1286 (Entrez Gene)
120131 (OMIM)
Chr2 q35-q37 Chr2:226968916-227164559 (-)
GRCh38
Alport Syndrome, Autosomal Recessive
P53420 (UniProt | EBI)
NM_000092 (RefSeq)
mouse Col4a4 MGI:104687 (MGI)
12829 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 42.2 cM Chr1:82452558-82586849 (-)
GRCm38
Alport Syndrome, Autosomal Recessive
OTTMUSG00000021695 (VEGA)
OTTMUSP00000024234 (VEGA)
OTTMUST00000051472 (VEGA)
chimpanzee COL4A4 459986 (Entrez Gene)
Chr2B XP_516128 (RefSeq)
rhesus macaque COL4A4 708287 (Entrez Gene)
Chr12 XP_001110249 (RefSeq)
dog COL4A4 403841 (Entrez Gene)
Chr25 NP_001026988 (RefSeq)
NM_001031818 (RefSeq)
chicken COL4A4 424799 (Entrez Gene)
Chr9 XP_422615 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory