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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human COL4A4 HGNC:2206 (HGNC)
1286 (Entrez Gene)
120131 (OMIM)
HGNC homology
Chr2 q35-q37 Chr2:226967532-227164559 (-)
Alport Syndrome, Autosomal Recessive
P53420 (UniProt | EBI)
NM_000092 (RefSeq)
mouse Col4a4 MGI:104687 (MGI)
12829 (Entrez Gene)
Gene Tree
HGNC homology
Chr1 42.2 cM Chr1:82448423-82586849 (-)
Alport Syndrome, Autosomal Recessive
OTTMUSG00000021695 (VEGA)
OTTMUSP00000024234 (VEGA)
OTTMUST00000051472 (VEGA)
chimpanzee COL4A4 459986 (Entrez Gene)
Chr2B XP_009442740 (RefSeq)
rhesus macaque COL4A4 708287 (Entrez Gene)
Chr12 XP_001110249 (RefSeq)
dog COL4A4 403841 (Entrez Gene)
Chr25 NP_001026988 (RefSeq)
NM_001031818 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.03
The Jackson Laboratory