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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
200

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human LPL HGNC:6677 (HGNC)
4023 (Entrez Gene)
609708 (OMIM)
Chr8 p22 Chr8:19939071-19967259 (+)
GRCh38
Hyperlipidemia, Familial Combined; FCHL
Hyperlipoproteinemia, Type I
Lipoprotein Lipase; LPL
P06858 (UniProt | EBI)
NM_000237 (RefSeq)
mouse Lpl MGI:96820 (MGI)
16956 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 33.88 cM Chr8:68880491-68907448 (+)
GRCm38
Hyperlipoproteinemia, Type I
OTTMUSG00000036084 (VEGA)
OTTMUSP00000051299 (VEGA)
OTTMUST00000092709 (VEGA)
rat Lpl 24539 (Entrez Gene)
Chr16 p14 Q06000 (UniProt | EBI)
NM_012598 (RefSeq)
chimpanzee LPL 464031 (Entrez Gene)
Chr8 XP_001149804 (RefSeq)
cattle LPL 280843 (Entrez Gene)
Chr8 P11151 (UniProt | EBI)
NM_001075120 (RefSeq)
dog LPL 403626 (Entrez Gene)
Chr25 XP_005635790 (RefSeq)
chicken LPL 396219 (Entrez Gene)
ChrZ P11602 (UniProt | EBI)
NM_205282 (RefSeq)
western clawed frog lpl 100127862 (Entrez Gene)
ChrUN XP_002934038 (RefSeq)
zebrafish LOC101884800 101884800 (Entrez Gene)
ChrUN XP_005174466 (RefSeq)
lpl 30354 (Entrez Gene)
Chr22 NP_571202 (RefSeq)
NM_131127 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory