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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human AMPD1 HGNC:468 (HGNC)
270 (Entrez Gene)
102770 (OMIM)
Chr1 p13 Chr1:114673098-114695618 (-)
GRCh38
Myopathy Due to Myoadenylate Deaminase Deficiency; MMDD
P23109 (UniProt | EBI)
NM_000036 (RefSeq)
mouse Ampd1 MGI:88015 (MGI)
229665 (Entrez Gene)
Gene Tree
VISTA-Point
Chr3 45.25 cM Chr3:103074014-103099714 (+)
GRCm38
OTTMUSG00000030299 (VEGA)
OTTMUSP00000039252 (VEGA)
OTTMUST00000075010 (VEGA)
rat Ampd1 25028 (Entrez Gene)
Chr2 q34 P10759 (UniProt | EBI)
NM_138876 (RefSeq)
chimpanzee AMPD1 457144 (Entrez Gene)
Chr1 XP_001149901 (RefSeq)
rhesus macaque AMPD1 708801 (Entrez Gene)
Chr1 XP_001111578 (RefSeq)
cattle AMPD1 512748 (Entrez Gene)
Chr3 NP_001093819 (RefSeq)
NM_001100349 (RefSeq)
dog AMPD1 606901 (Entrez Gene)
Chr17 XP_848536 (RefSeq)
chicken AMPD1 772125 (Entrez Gene)
Chr26 XP_003642776 (RefSeq)
western clawed frog ampd1 100488507 (Entrez Gene)
ChrUN XP_002935821 (RefSeq)
zebrafish ampd1 393867 (Entrez Gene)
Chr8 NP_957187 (RefSeq)
NM_200893 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/16/2014
MGI 5.19
The Jackson Laboratory