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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1981

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PHKA1 HGNC:8925 (HGNC)
5255 (Entrez Gene)
311870 (OMIM)
HGNC homology
ChrX q13.1 ChrX:72578814-72714181 (-)
GRCh38.p2
Glycogen Storage Disease, Type Ixd; GSD9D
P46020 (UniProt | EBI)
NM_001172436 (RefSeq)
mouse Phka1 MGI:97576 (MGI)
18679 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
ChrX 45.47 cM ChrX:102513975-102644246 (-)
GRCm38
Glycogen Storage Disease, Type Ixd; GSD9D
OTTMUSG00000018059 (VEGA)
OTTMUSP00000019604 (VEGA)
OTTMUST00000043625 (VEGA)
rat Phka1 64561 (Entrez Gene)
ChrX q22 Q64649 (UniProt | EBI)
NM_022626 (RefSeq)
chimpanzee PHKA1 465713 (Entrez Gene)
ChrX XP_016799207 (RefSeq)
cattle PHKA1 100336808 (Entrez Gene)
ChrX XP_005228049 (RefSeq)
dog PHKA1 491956 (Entrez Gene)
ChrX XP_005641551 (RefSeq)
chicken PHKA1 422181 (Entrez Gene)
Chr4 XP_004940658 (RefSeq)
zebrafish phka1a 572183 (Entrez Gene)
Chr7 XP_005166576 (RefSeq)
phka1b 562402 (Entrez Gene)
Chr21 XP_009293853 (RefSeq)
frog, western clawed phka1 100158624 (Entrez Gene)
Chr8 NP_001121510 (RefSeq)
NM_001128038 (RefSeq)
macaque, rhesus PHKA1 699764 (Entrez Gene)
ChrX NP_001248127 (RefSeq)
NM_001261198 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/29/2016
MGI 6.06
The Jackson Laboratory