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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
19521

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human FAM171A1 HGNC:23522 (HGNC)
221061 (Entrez Gene)
HGNC homology
Chr10 p13 Chr10:15211643-15374532 (-)
GRCh38.p7
Q5VUB5 (UniProt | EBI)
NM_001010924 (RefSeq)
mouse Fam171a1 MGI:2442917 (MGI)
269233 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr2 1.73 cM Chr2:3114224-3227806 (+)
GRCm38
269233 (NCBI Gene Model)
NP_001074630 (RefSeq)
NM_001081161 (RefSeq)
rat Fam171a1 680259 (Entrez Gene)
Chr17 q12.3 XP_008772249 (RefSeq)
chimpanzee FAM171A1 450322 (Entrez Gene)
Chr10 XP_016818206 (RefSeq)
cattle FAM171A1 534850 (Entrez Gene)
Chr13 NP_001095650 (RefSeq)
NM_001102180 (RefSeq)
dog FAM171A1 607108 (Entrez Gene)
Chr2 XP_022266914 (RefSeq)
chicken FAM171A1 420528 (Entrez Gene)
Chr2 XP_004939319 (RefSeq)
zebrafish fam171a1 795681 (Entrez Gene)
Chr16 XP_021322597 (RefSeq)
frog, western clawed fam171a1 100170195 (Entrez Gene)
Chr6 XP_002939068 (RefSeq)
macaque, rhesus FAM171A1 703843 (Entrez Gene)
Chr9 XP_028681848 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
01/14/2020
MGI 6.14
The Jackson Laboratory