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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
19503

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RTP2 HGNC:32486 (HGNC)
344892 (Entrez Gene)
609138 (OMIM)
HGNC homology
Chr3 q27.3 Chr3:187698259-187715625 (-)
GRCh38.p7
Q5QGT7 (UniProt | EBI)
NM_001004312 (RefSeq)
mouse Rtp2 MGI:2685451 (MGI)
224055 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr16 15.12 cM Chr16:23925548-23930794 (-)
GRCm38
224055 (NCBI Gene Model)
Q80ZI2 (UniProt | EBI)
NM_001008230 (RefSeq)
rat Rtp2 303835 (Entrez Gene)
Chr11 q23 NP_001100553 (RefSeq)
NM_001107083 (RefSeq)
chimpanzee RTP2 471036 (Entrez Gene)
Chr3 XP_016797975 (RefSeq)
cattle RTP2 539817 (Entrez Gene)
Chr1 NP_001179245 (RefSeq)
NM_001192316 (RefSeq)
dog RTP2 488123 (Entrez Gene)
Chr34 XP_545247 (RefSeq)
chicken RTP2 101751236 (Entrez Gene)
Chr9 XP_004943393 (RefSeq)
macaque, rhesus RTP2 708823 (Entrez Gene)
Chr2 XP_001103946 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
07/09/2019
MGI 6.14
The Jackson Laboratory