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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
195

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SGCB HGNC:10806 (HGNC)
6443 (Entrez Gene)
600900 (OMIM)
Chr4 q12 Chr4:52019586-52052400 (-)
GRCh38
Muscular Dystrophy, Limb-Girdle, Type 2E; LGMD2E
Q16585 (UniProt | EBI)
NM_000232 (RefSeq)
mouse Sgcb MGI:1346523 (MGI)
24051 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 38.89 cM Chr5:73632749-73647713 (-)
GRCm38
Muscular Dystrophy, Limb-Girdle, Type 2E; LGMD2E
ENSMUSG00000029156 (Ensembl Gene Model)
ENSMUSP00000079937 (Ensembl)
ENSMUST00000081170 (Ensembl)
rat Sgcb 680229 (Entrez Gene)
Chr14 p11 NP_001177997 (RefSeq)
NM_001191068 (RefSeq)
chimpanzee SGCB 461332 (Entrez Gene)
Chr4 XP_517299 (RefSeq)
rhesus macaque SGCB 702684 (Entrez Gene)
Chr5 XP_001090970 (RefSeq)
cattle SGCB 535372 (Entrez Gene)
Chr6 A6QP70 (UniProt | EBI)
NM_001102188 (RefSeq)
dog SGCB 611066 (Entrez Gene)
Chr13 XP_853790 (RefSeq)
chicken SGCB 422760 (Entrez Gene)
Chr4 NP_001026326 (RefSeq)
NM_001031155 (RefSeq)
western clawed frog sgcb 100216021 (Entrez Gene)
ChrUN NP_001135484 (RefSeq)
NM_001142012 (RefSeq)
zebrafish sgcb 559788 (Entrez Gene)
Chr20 NP_001030145 (RefSeq)
NM_001034973 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory