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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1946

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PCOLCE HGNC:8738 (HGNC)
5118 (Entrez Gene)
600270 (OMIM)
PCOLCE (MyGene.info)
HGNC homology
Chr7 q22.1 Chr7:100602259-100608175 (+)
GRCh38.p7
Q15113 (UniProt | EBI)
NM_002593 (RefSeq)
mouse Pcolce MGI:105099 (MGI)
18542 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr5 76.59 cM Chr5:137605103-137613784 (-)
GRCm38
OTTMUSG00000021947 (VEGA)
OTTMUSP00000024636 (VEGA)
OTTMUST00000052097 (VEGA)
rat Pcolce 29569 (Entrez Gene)
Chr12 q12 O08628 (UniProt | EBI)
NM_019237 (RefSeq)
chimpanzee PCOLCE 463604 (Entrez Gene)
Chr7 XP_519264 (RefSeq)
cattle PCOLCE 504471 (Entrez Gene)
Chr25 NP_001039353 (RefSeq)
NM_001045888 (RefSeq)
dog PCOLCE 489835 (Entrez Gene)
Chr6 XP_859401 (RefSeq)
zebrafish pcolcea 563867 (Entrez Gene)
Chr10 NP_001025352 (RefSeq)
NM_001030181 (RefSeq)
pcolceb 794872 (Entrez Gene)
Chr7 NP_001122259 (RefSeq)
NM_001128787 (RefSeq)
frog, western clawed pcolce 493519 (Entrez Gene)
ChrUN NP_001008157 (RefSeq)
NM_001008156 (RefSeq)
macaque, rhesus PCOLCE 712496 (Entrez Gene)
Chr3 XP_001104751 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/07/2017
MGI 6.11
The Jackson Laboratory